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My 1999 S2000 is not recognized on the Honda website.
It was registered in 09/1999 for the first time in Belgium. Boat from Japan to Europe should be around 8 weeks i guess. That means it should have been build in 07/1999 at least?
UK/Euro/AUS S2000s use essentially the same VIN system as the U.S. cars, with the 10th digit indicating the model year: Y=2000, and 1-9 = 2001-2009, respectively. So your car registered in 1999 should have a Y in the tenth digit. Production of non-JDM cars started in June 1999.